Create all R scripts listed in the table of tables (TOT)

This function loads the TOT and creates all the R scripts for figures and tables listed there in their respective directories in the R folder. Any existing scripts with the same names will NOT be overwritten.

Usage

create_from_tot(dry_run = TRUE, quiet = getOption("lbstproj.quiet", FALSE))

Arguments

dry_run

Logical. If TRUE, no files are created and the function only reports what would be generated.

Default: TRUE to avoid generate wrong scripts by mistake.

quiet

Logical. If TRUE, suppress informational messages.

Default: FALSE unless the global option lbstproj.quiet is set otherwise. The default option can be changed

Value

Invisibly returns NULL. The function is called for its side effects (file creation and CLI reporting).

Examples

if(FALSE) {
# Hypothetical project structure:
# R/
# |-- figures/
#    \-- fig_01_flowchart.R
# \-- tables/
#     \-- tab_01_baseline.R

# TOT contains:
#   - fig_01_flowchart
#   - fig_02_primary
#   - tab_01_baseline
#   - tab_02_primary

# Dry run (no files created)
create_from_tot()

# Example CLI output:
#
# Figures
# i Figures: 2 in TOT, 1 on disk, 1 matched.
# i Figures: would generate 1 missing program (keeping 1 existing).
# i Figures: would create 1 program in R/figures.
# * R/figures/fig_02_primary.R
#
# Tables
# i Tables: 2 in TOT, 1 on disk, 1 matched.
# i Tables: would generate 1 missing program (keeping 1 existing).
# i Tables: would create 1 program in R/tables.
# * R/tables/tab_02_primary.R

# Actual creation
create_from_tot(dry_run = FALSE)
}